Research workbench
AlphaFold monomer V2.0 prediction for exopolygalacturonase B (Q27UB1)
Analyse AlphaFold monomer V2.0 prediction for exopolygalacturonase B (Q27UB1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q27UB1
- Type
- protein
- Length
- 438 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5e58272ea25a05e06901A2eAe9f63939b344e0c6
- Molecule
- Exopolygalacturonase B
- UniProt
- Q27UB1
- Pockets
- 2 · best druggability 0.62
Structure
1 distinct chain · 10% helix, 50% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Exopolygalacturonase B | protein | 438 | 10% helix, 50% strand | Q27UB1 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 384 | 0.62 | 0.77 | 58 | empty |
| 2 | 52 | 0.25 | 0.72 | 15 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q27UB1
- Elsewhere: UniProt Q27UB1 · AlphaFold DB Q27UB1
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