Research workbench
AlphaFold monomer V2.0 prediction for geranylgeranyl transferase type-1 subunit beta (Q55DA3)
Analyse AlphaFold monomer V2.0 prediction for geranylgeranyl transferase type-1 subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q55DA3
- Type
- protein
- Length
- 352 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8579D35F9BDa0134778778b50BE4F4A1D75BBD52
- Molecule
- Geranylgeranyl transferase type-1 subunit beta
- UniProt
- Q55DA3
- Pockets
- 4 · best druggability 0.63
Structure
1 distinct chain · 52% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Geranylgeranyl transferase type-1 subunit beta | protein | 352 | 52% helix, 5% strand | Q55DA3 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 326 | 0.63 | 0.79 | 33 | empty |
| 2 | 80 | 0.55 | 0.86 | 24 | empty |
| 3 | 88 | 0.40 | 0.77 | 17 | empty |
| 4 | 60 | 0.31 | 0.75 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q55DA3
- Elsewhere: UniProt Q55DA3 · AlphaFold DB Q55DA3
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