Research workbench
AlphaFold monomer V2.0 prediction for biglycan (O02678)
Analyse AlphaFold monomer V2.0 prediction for biglycan (O02678) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O02678
- Type
- protein
- Length
- 369 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA55fA446aDFd185F1deb3281162E4D0d9a8056F7
- Molecule
- Biglycan
- UniProt
- O02678
- Pockets
- 5 · best druggability 0.47
Structure
1 distinct chain · 8% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Biglycan | protein | 369 | 8% helix, 14% strand | O02678 |
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 134 | 0.47 | 0.78 | 19 | empty |
| 2 | 104 | 0.40 | 0.76 | 15 | empty |
| 3 | 110 | 0.40 | 0.75 | 16 | empty |
| 4 | 54 | 0.32 | 0.77 | 12 | empty |
| 5 | 68 | 0.31 | 0.75 | 20 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O02678
- Elsewhere: UniProt O02678 · AlphaFold DB O02678
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