Research workbench
AlphaFold monomer V2.0 prediction for peptidoglycan recognition protein (O76537)
Analyse AlphaFold monomer V2.0 prediction for peptidoglycan recognition protein (O76537) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O76537
- Type
- protein
- Length
- 182 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2B6383898c41F2462737128e3CAF97Eebe0482a0
- Molecule
- Peptidoglycan recognition protein
- UniProt
- O76537
- Pockets
- 2 · best druggability 0.46
Structure
1 distinct chain · 29% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Peptidoglycan recognition protein | protein | 182 | 29% helix, 18% strand | O76537 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 64 | 0.46 | 0.83 | 21 | empty |
| 2 | 82 | 0.35 | 0.75 | 19 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O76537
- Elsewhere: UniProt O76537 · AlphaFold DB O76537
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