Research workbench
AlphaFold monomer V2.0 prediction for cdp-diacylglycerol-- glycerol-3-phosphate 3-phosphatidyltransferase (P79001)
Analyse AlphaFold monomer V2.0 prediction for cdp-diacylglycerol-- glycerol-3-phosphate… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P79001
- Type
- protein
- Length
- 521 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0A8D4a5B4828846390525641fD0a4311Eea31D88
- Molecule
- Cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
- UniProt
- P79001
- Pockets
- 7 · best druggability 0.73
Structure
1 distinct chain · 36% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | protein | 521 | 36% helix, 21% strand | P79001 |
Pockets
7 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 726 | 0.73 | 0.79 | 58 | empty |
| 2 | 103 | 0.49 | 0.81 | 17 | empty |
| 3 | 131 | 0.45 | 0.77 | 26 | empty |
| 4 | 51 | 0.39 | 0.81 | 12 | empty |
| 5 | 100 | 0.36 | 0.74 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P79001
- Elsewhere: UniProt P79001 · AlphaFold DB P79001
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