Research workbench
AlphaFold monomer V2.0 prediction for cdp-diacylglycerol-- glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial (Q5R8K7)
Analyse AlphaFold monomer V2.0 prediction for cdp-diacylglycerol-- glycerol-3-phosphate… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5R8K7
- Type
- protein
- Length
- 556 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4632f3e5B66f7f798cE4c3EF1f52b968bC679d44
- Molecule
- Cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial
- UniProt
- Q5R8K7
- Pockets
- 6 · best druggability 0.75
Structure
1 distinct chain · 48% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial | protein | 556 | 48% helix, 19% strand | Q5R8K7 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 898 | 0.75 | 0.78 | 78 | empty |
| 2 | 341 | 0.69 | 0.82 | 48 | empty |
| 3 | 371 | 0.57 | 0.75 | 35 | empty |
| 4 | 70 | 0.40 | 0.79 | 17 | empty |
| 5 | 66 | 0.31 | 0.75 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5R8K7
- Elsewhere: UniProt Q5R8K7 · AlphaFold DB Q5R8K7
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