Research workbench
AlphaFold monomer V2.0 prediction for probable polygalacturonase AT1G80170 (Q94AJ5)
Analyse AlphaFold monomer V2.0 prediction for probable polygalacturonase AT1G80170… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q94AJ5
- Type
- protein
- Length
- 444 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd10960F956646DE8b64d3598984c91C2d5Af3D7b
- Molecule
- Probable polygalacturonase AT1G80170
- UniProt
- Q94AJ5
- Pockets
- 2 · best druggability 0.48
Structure
1 distinct chain · 13% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable polygalacturonase AT1G80170 | protein | 444 | 13% helix, 47% strand | Q94AJ5 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 73 | 0.48 | 0.83 | 20 | empty |
| 2 | 246 | 0.47 | 0.73 | 32 | empty |
Modifications
Observed in the structure: 6 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q94AJ5
- Elsewhere: UniProt Q94AJ5 · AlphaFold DB Q94AJ5
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