Research workbench
AlphaFold monomer V2.0 prediction for endo-polygalacturonase (P18192)
Analyse AlphaFold monomer V2.0 prediction for endo-polygalacturonase (P18192) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P18192
- Type
- protein
- Length
- 402 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf4ED13986579E8e227b3ED6c02276c648754EC27
- Molecule
- Endo-polygalacturonase
- UniProt
- P18192
- Pockets
- 2 · best druggability 0.59
Structure
1 distinct chain · 6% helix, 46% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Endo-polygalacturonase | protein | 402 | 6% helix, 46% strand | P18192 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 415 | 0.59 | 0.75 | 47 | empty |
| 2 | 76 | 0.31 | 0.74 | 21 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P18192
- Elsewhere: UniProt P18192 · AlphaFold DB P18192
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