Research workbench
AlphaFold monomer V2.0 prediction for probable endopolygalacturonase I (B8N8M2)
Analyse AlphaFold monomer V2.0 prediction for probable endopolygalacturonase I (B8N8M2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B8N8M2
- Type
- protein
- Length
- 367 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa73BAb1DabE4333A884D03393eAa10c3B4215494
- Molecule
- Probable endopolygalacturonase I
- UniProt
- B8N8M2
- Pockets
- 1 · best druggability 0.52
Structure
1 distinct chain · 5% helix, 46% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable endopolygalacturonase I | protein | 367 | 5% helix, 46% strand | B8N8M2 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 297 | 0.52 | 0.74 | 44 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8N8M2
- Elsewhere: UniProt B8N8M2 · AlphaFold DB B8N8M2
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