Research workbench
AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (B7IDG7)
Analyse AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (B7IDG7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B7IDG7
- Type
- protein
- Length
- 402 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB05a6C07895e32B47A59E248baa07d66d77b0e17
- Molecule
- Phosphoglycerate kinase
- UniProt
- B7IDG7
- Pockets
- 4 · best druggability 0.50
Structure
1 distinct chain · 42% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphoglycerate kinase | protein | 402 | 42% helix, 18% strand | B7IDG7 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 176 | 0.50 | 0.78 | 35 | empty |
| 2 | 85 | 0.37 | 0.76 | 19 | empty |
| 3 | 60 | 0.30 | 0.75 | 13 | empty |
| 4 | 58 | 0.28 | 0.75 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B7IDG7
- Elsewhere: UniProt B7IDG7 · AlphaFold DB B7IDG7
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