Research workbench
AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (P50313)
Analyse AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (P50313) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P50313
- Type
- protein
- Length
- 420 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB93Fe2eFA4192A156339845A2c441375da46c92A
- Molecule
- Phosphoglycerate kinase
- UniProt
- P50313
- Pockets
- 3 · best druggability 0.50
Structure
1 distinct chain · 43% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphoglycerate kinase | protein | 420 | 43% helix, 19% strand | P50313 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 143 | 0.50 | 0.79 | 43 | empty |
| 2 | 163 | 0.44 | 0.75 | 31 | empty |
| 3 | 70 | 0.32 | 0.75 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P50313
- Elsewhere: UniProt P50313 · AlphaFold DB P50313
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