Research workbench
AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (A4VSN8)
Analyse AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (A4VSN8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4VSN8
- Type
- protein
- Length
- 399 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC746AF6f646b588a47acE344208619CfEF12dD4b
- Molecule
- Phosphoglycerate kinase
- UniProt
- A4VSN8
- Pockets
- 3 · best druggability 0.43
Structure
1 distinct chain · 40% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphoglycerate kinase | protein | 399 | 40% helix, 16% strand | A4VSN8 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 185 | 0.43 | 0.74 | 35 | empty |
| 2 | 85 | 0.40 | 0.78 | 20 | empty |
| 3 | 57 | 0.32 | 0.76 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4VSN8
- Elsewhere: UniProt A4VSN8 · AlphaFold DB A4VSN8
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