Research workbench
AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (B4U0W3)
Analyse AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (B4U0W3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B4U0W3
- Type
- protein
- Length
- 398 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x661f92Fc5950020C7aB410B5F5b9a3f429F49Ae5
- Molecule
- Phosphoglycerate kinase
- UniProt
- B4U0W3
- Pockets
- 4 · best druggability 0.39
Structure
1 distinct chain · 41% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphoglycerate kinase | protein | 398 | 41% helix, 16% strand | B4U0W3 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 84 | 0.39 | 0.78 | 20 | empty |
| 2 | 125 | 0.39 | 0.74 | 25 | empty |
| 3 | 55 | 0.36 | 0.79 | 17 | empty |
| 4 | 50 | 0.23 | 0.73 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4U0W3
- Elsewhere: UniProt B4U0W3 · AlphaFold DB B4U0W3
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