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AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (Q6GIL7)

Analyse AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (Q6GIL7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q6GIL7
Type: protein
Length: 396 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x0D671490EE06E75975e90D7F99F73B20BE618744
Molecule: Phosphoglycerate kinase
UniProt: Q6GIL7
Pockets: 2 · best druggability 0.42

Structure

1 distinct chain · 41% helix, 18% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Phosphoglycerate kinase	protein	396	41% helix, 18% strand	Q6GIL7

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	83	0.42	0.79	19	empty
2	112	0.37	0.74	24	empty

Compared structures

4DG5 · Crystal structure of staphylococcal phosphoglycerate kinase · an experimental structure of the same protein · chain A against A, TM-score 0.99
4DG5 · Crystal structure of staphylococcal Phosphoglycerate kinase · an experimental structure of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6GIL7
Elsewhere: UniProt Q6GIL7 · AlphaFold DB Q6GIL7

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