Research workbench
AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (A9BDF8)
Analyse AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (A9BDF8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A9BDF8
- Type
- protein
- Length
- 402 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xACf562eCE43b1086A6879785600A6F1cd3014BB9
- Molecule
- Phosphoglycerate kinase
- UniProt
- A9BDF8
- Pockets
- 3 · best druggability 0.44
Structure
1 distinct chain · 42% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphoglycerate kinase | protein | 402 | 42% helix, 18% strand | A9BDF8 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 121 | 0.44 | 0.77 | 35 | empty |
| 2 | 116 | 0.37 | 0.74 | 20 | empty |
| 3 | 55 | 0.33 | 0.77 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A9BDF8
- Elsewhere: UniProt A9BDF8 · AlphaFold DB A9BDF8
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