Research workbench
AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (C6DFH7)
Analyse AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (C6DFH7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C6DFH7
- Type
- protein
- Length
- 387 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7Fc2FCdc43da62802992E6eD563AB4572b55CAe4
- Molecule
- Phosphoglycerate kinase
- UniProt
- C6DFH7
- Pockets
- 3 · best druggability 0.45
Structure
1 distinct chain · 41% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphoglycerate kinase | protein | 387 | 41% helix, 18% strand | C6DFH7 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 56 | 0.45 | 0.84 | 16 | empty |
| 2 | 97 | 0.45 | 0.79 | 26 | empty |
| 3 | 52 | 0.27 | 0.74 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C6DFH7
- Elsewhere: UniProt C6DFH7 · AlphaFold DB C6DFH7
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