Research workbench
AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (B5RKV5)
Analyse AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (B5RKV5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5RKV5
- Type
- protein
- Length
- 392 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5e58272ea25a05e06901A2eAe9f63939b344e0c6
- Molecule
- Phosphoglycerate kinase
- UniProt
- B5RKV5
- Pockets
- 2 · best druggability 0.43
Structure
1 distinct chain · 40% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphoglycerate kinase | protein | 392 | 40% helix, 17% strand | B5RKV5 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 121 | 0.43 | 0.77 | 30 | empty |
| 2 | 90 | 0.43 | 0.79 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5RKV5
- Elsewhere: UniProt B5RKV5 · AlphaFold DB B5RKV5
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