Research workbench
AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (A1WD35)
Analyse AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (A1WD35) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A1WD35
- Type
- protein
- Length
- 397 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4d07E6a23DeB6B95bd9b90EcB67368b7e8D3B77e
- Molecule
- Phosphoglycerate kinase
- UniProt
- A1WD35
- Pockets
- 3 · best druggability 0.47
Structure
1 distinct chain · 43% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphoglycerate kinase | protein | 397 | 43% helix, 18% strand | A1WD35 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 125 | 0.47 | 0.79 | 35 | empty |
| 2 | 78 | 0.44 | 0.81 | 17 | empty |
| 3 | 108 | 0.42 | 0.77 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1WD35
- Elsewhere: UniProt A1WD35 · AlphaFold DB A1WD35
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