Research workbench
AlphaFold monomer V2.0 prediction for phosphoglycerate kinase 1 (P16617)
Analyse AlphaFold monomer V2.0 prediction for phosphoglycerate kinase 1 (P16617) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P16617
- Type
- protein
- Length
- 417 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x67Cfa51D47d3aEF6be80EF3a7dDDb43e89bf6Ade
- Molecule
- Phosphoglycerate kinase 1
- UniProt
- P16617
- Pockets
- 4 · best druggability 0.49
Structure
1 distinct chain · 41% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphoglycerate kinase 1 | protein | 417 | 41% helix, 20% strand | P16617 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 159 | 0.49 | 0.78 | 39 | empty |
| 2 | 196 | 0.47 | 0.75 | 27 | empty |
| 3 | 80 | 0.39 | 0.77 | 16 | empty |
| 4 | 80 | 0.31 | 0.74 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P16617
- Elsewhere: UniProt P16617 · AlphaFold DB P16617
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