Research workbench
AlphaFold monomer V2.0 prediction for platelet-derived growth factor receptor beta (Q6QNF3)
Analyse AlphaFold monomer V2.0 prediction for platelet-derived growth factor receptor… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6QNF3
- Type
- protein
- Length
- 1,103 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa73BAb1DabE4333A884D03393eAa10c3B4215494
- Molecule
- Platelet-derived growth factor receptor beta
- UniProt
- Q6QNF3
- Pockets
- 8 · best druggability 0.71
Structure
1 distinct chain · 17% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Platelet-derived growth factor receptor beta | protein | 1103 | 17% helix, 31% strand | Q6QNF3 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 778 | 0.71 | 0.77 | 69 | empty |
| 2 | 488 | 0.71 | 0.81 | 29 | empty |
| 3 | 181 | 0.57 | 0.81 | 28 | empty |
| 4 | 251 | 0.54 | 0.76 | 40 | empty |
| 5 | 211 | 0.45 | 0.73 | 30 | empty |
Modifications
Observed in the structure: 5 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6QNF3
- Elsewhere: UniProt Q6QNF3 · AlphaFold DB Q6QNF3
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