Research workbench
AlphaFold monomer V2.0 prediction for brevican core protein (P55068)
Analyse AlphaFold monomer V2.0 prediction for brevican core protein (P55068) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P55068
- Type
- protein
- Length
- 883 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xCe773cD4fDc93809B870b4C80617739715B2454d
- Molecule
- Brevican core protein
- UniProt
- P55068
- Pockets
- 5 · best druggability 0.55
Structure
1 distinct chain · 7% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Brevican core protein | protein | 883 | 7% helix, 24% strand | P55068 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 279 | 0.55 | 0.76 | 38 | empty |
| 2 | 207 | 0.54 | 0.78 | 26 | empty |
| 3 | 287 | 0.53 | 0.75 | 31 | empty |
| 4 | 54 | 0.32 | 0.76 | 15 | empty |
| 5 | 63 | 0.26 | 0.72 | 12 | empty |
Modifications
Observed in the structure: 13 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P55068
- Elsewhere: UniProt P55068 · AlphaFold DB P55068
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