Research workbench
AlphaFold monomer V2.0 prediction for PYRUVATE:FERREDOXIN oxidoreductase (P94692)
Analyse AlphaFold monomer V2.0 prediction for PYRUVATE:FERREDOXIN oxidoreductase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P94692
- Type
- protein
- Length
- 1,232 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x39e0682e8B0b3E155c77Cf3E51A807F25E84659c
- Molecule
- PYRUVATE:FERREDOXIN oxidoreductase
- UniProt
- P94692
- Pockets
- 14 · best druggability 0.82
Structure
1 distinct chain · 41% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | PYRUVATE:FERREDOXIN oxidoreductase | protein | 1232 | 41% helix, 16% strand | P94692 |
Pockets
14 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 640 | 0.82 | 0.87 | 116 | empty |
| 2 | 187 | 0.76 | 0.92 | 46 | empty |
| 3 | 261 | 0.70 | 0.85 | 28 | empty |
| 4 | 148 | 0.65 | 0.87 | 27 | empty |
| 5 | 232 | 0.59 | 0.80 | 31 | empty |
Compared structures
- 2C3Y · Crystal structure of the radical form of PYRUVATE:FERREDOXIN oxidoreductase from… · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 2C3Y · CRYSTAL STRUCTURE OF THE RADICAL FORM OF PYRUVATE:FERREDOXIN OXIDOREDUCTASE FROM… · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 2C3P · Crystal structure of the free radical intermediate of PYRUVATE:FERREDOXIN oxidoreductase… · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 2C3P · CRYSTAL STRUCTURE OF THE FREE RADICAL INTERMEDIATE OF PYRUVATE:FERREDOXIN OXIDOREDUCTASE… · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 2UZA · Crystal structure of the free radical intermediate of PYRUVATE:FERREDOXIN oxidoreductase… · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 2UZA · Crystal structure of the free radical intermediate of PYRUVATE:FERREDOXIN oxidoreductase… · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 1KEK · Crystal Structure of the Free Radical Intermediate of Pyruvate:Ferredoxin Oxidoreductase · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 1KEK · Crystal structure of the free radical intermediate of PYRUVATE:FERREDOXIN oxidoreductase · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 2C3O · Crystal structure of the free radical intermediate of PYRUVATE:FERREDOXIN oxidoreductase… · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 2C3O · CRYSTAL STRUCTURE OF THE FREE RADICAL INTERMEDIATE OF PYRUVATE:FERREDOXIN OXIDOREDUCTASE… · an experimental structure of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P94692
- Elsewhere: UniProt P94692 · AlphaFold DB P94692
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