Research workbench
AlphaFold monomer V2.0 prediction for peroxisome biogenesis protein 1 (Q9FNP1)
Analyse AlphaFold monomer V2.0 prediction for peroxisome biogenesis protein 1 (Q9FNP1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9FNP1
- Type
- protein
- Length
- 1,130 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9188600a0FCa2914254C94299b1bd9721Bc4D500
- Molecule
- Peroxisome biogenesis protein 1
- UniProt
- Q9FNP1
- Pockets
- 19 · best druggability 0.72
Structure
1 distinct chain · 36% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Peroxisome biogenesis protein 1 | protein | 1130 | 36% helix, 20% strand | Q9FNP1 |
Pockets
19 pockets found on a 1 Å grid, 9 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 514 | 0.72 | 0.81 | 50 | empty |
| 2 | 285 | 0.62 | 0.80 | 46 | empty |
| 3 | 74 | 0.61 | 0.89 | 23 | empty |
| 4 | 217 | 0.57 | 0.79 | 43 | empty |
| 5 | 189 | 0.57 | 0.80 | 33 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9FNP1
- Elsewhere: UniProt Q9FNP1 · AlphaFold DB Q9FNP1
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