Research workbench

AlphaFold monomer V2.0 prediction for beta-ala-xaa dipeptidase (P45494)

Analyse AlphaFold monomer V2.0 prediction for beta-ala-xaa dipeptidase (P45494) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P45494
Type: protein
Length: 470 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xaCAaE32D8E5EFccE18B7F469F2E9Bf2D1cC6c8c3
Molecule: Beta-ala-xaa dipeptidase
UniProt: P45494
Pockets: 1 · best druggability 0.69

Structure

1 distinct chain · 32% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Beta-ala-xaa dipeptidase	protein	470	32% helix, 26% strand	P45494

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	407	0.69	0.81	60	empty

Compared structures

1LFW · Crystal structure of pepv · an experimental structure of the same protein · chain A against A, TM-score 0.99
1LFW · Crystal structure of pepV · an experimental structure of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P45494
Elsewhere: UniProt P45494 · AlphaFold DB P45494

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