Research workbench
AlphaFold monomer V2.0 prediction for peptide transporter 3 (O01840)
Analyse AlphaFold monomer V2.0 prediction for peptide transporter 3 (O01840) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O01840
- Type
- protein
- Length
- 701 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x79387714350Be024a8CEbae6DDa6530bD09b565E
- Molecule
- Peptide transporter 3
- UniProt
- O01840
- Pockets
- 6 · best druggability 0.78
Structure
1 distinct chain · 54% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Peptide transporter 3 | protein | 701 | 54% helix, 16% strand | O01840 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 839 | 0.78 | 0.81 | 63 | empty |
| 2 | 491 | 0.71 | 0.80 | 56 | empty |
| 3 | 215 | 0.54 | 0.77 | 40 | empty |
| 4 | 136 | 0.44 | 0.76 | 28 | empty |
| 5 | 96 | 0.34 | 0.72 | 15 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O01840
- Elsewhere: UniProt O01840 · AlphaFold DB O01840
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