Research workbench

AlphaFold monomer V2.0 prediction for xaa-pro dipeptidase (P21165)

Analyse AlphaFold monomer V2.0 prediction for xaa-pro dipeptidase (P21165) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P21165
Type: protein
Length: 443 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xdF2b063d4B94F3f46D117B1af99A846bD4a59284
Molecule: Xaa-pro dipeptidase
UniProt: P21165
Pockets: 7 · best druggability 0.46

Structure

1 distinct chain · 37% helix, 16% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Xaa-pro dipeptidase	protein	443	37% helix, 16% strand	P21165

Pockets

7 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	98	0.46	0.80	19	empty
2	145	0.44	0.76	20	empty
3	89	0.40	0.78	21	empty
4	120	0.37	0.73	20	empty
5	50	0.36	0.80	16	empty

Compared structures

4QR8 · Crystal structure of E COLI pepq · an experimental structure of the same protein · chain A against A, TM-score 0.99
4QR8 · Crystal Structure of E coli pepQ · an experimental structure of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P21165
Elsewhere: UniProt P21165 · AlphaFold DB P21165

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