Research workbench
AlphaFold monomer V2.0 prediction for probable dipeptidase B (P0DD27)
Analyse AlphaFold monomer V2.0 prediction for probable dipeptidase B (P0DD27) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0DD27
- Type
- protein
- Length
- 499 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
- Molecule
- Probable dipeptidase B
- UniProt
- P0DD27
- Pockets
- 6 · best druggability 0.64
Structure
1 distinct chain · 33% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable dipeptidase B | protein | 499 | 33% helix, 21% strand | P0DD27 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 375 | 0.64 | 0.79 | 37 | empty |
| 2 | 162 | 0.47 | 0.76 | 23 | empty |
| 3 | 56 | 0.42 | 0.83 | 17 | empty |
| 4 | 54 | 0.40 | 0.82 | 15 | empty |
| 5 | 70 | 0.31 | 0.74 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DD27
- Elsewhere: UniProt P0DD27 · AlphaFold DB P0DD27
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