Research workbench
AlphaFold monomer V2.0 prediction for pepsin a (P00793)
Analyse AlphaFold monomer V2.0 prediction for pepsin a (P00793) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P00793
- Type
- protein
- Length
- 367 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- Pepsin a
- UniProt
- P00793
- Pockets
- 2 · best druggability 0.62
Structure
1 distinct chain · 22% helix, 39% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pepsin a | protein | 367 | 22% helix, 39% strand | P00793 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 320 | 0.62 | 0.79 | 41 | empty |
| 2 | 77 | 0.47 | 0.82 | 18 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00793
- Elsewhere: UniProt P00793 · AlphaFold DB P00793
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