Research workbench
AlphaFold monomer V2.0 prediction for exo-poly-alpha-D- galacturonosidase (P15922)
Analyse AlphaFold monomer V2.0 prediction for exo-poly-alpha-D- galacturonosidase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P15922
- Type
- protein
- Length
- 602 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6Ed09D80e98fE15DE51C9E7a8896AbF1f2365C3e
- Molecule
- Exo-poly-alpha-D-galacturonosidase
- UniProt
- P15922
- Pockets
- 6 · best druggability 0.69
Structure
1 distinct chain · 11% helix, 42% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Exo-poly-alpha-D-galacturonosidase | protein | 602 | 11% helix, 42% strand | P15922 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 294 | 0.69 | 0.84 | 43 | empty |
| 2 | 330 | 0.60 | 0.78 | 60 | empty |
| 3 | 73 | 0.36 | 0.77 | 19 | empty |
| 4 | 65 | 0.32 | 0.75 | 13 | empty |
| 5 | 67 | 0.28 | 0.73 | 16 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P15922
- Elsewhere: UniProt P15922 · AlphaFold DB P15922
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