Research workbench
AlphaFold monomer V2.0 prediction for pyridoxal 5'-phosphate synthase subunit pdxt (Q59055)
Analyse AlphaFold monomer V2.0 prediction for pyridoxal 5'-phosphate synthase subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q59055
- Type
- protein
- Length
- 186 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb3c0C983Fc44934AC589D7131C08a72544EBB92E
- Molecule
- Pyridoxal 5'-phosphate synthase subunit pdxt
- UniProt
- Q59055
- Pockets
- 1 · best druggability 0.38
Structure
1 distinct chain · 27% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pyridoxal 5'-phosphate synthase subunit pdxt | protein | 186 | 27% helix, 34% strand | Q59055 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 62 | 0.38 | 0.79 | 15 | empty |
Compared structures
- 2YWJ · Crystal structure of uncharacterized conserved protein from Methanocaldococcus jannaschii · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 2YWJ · Crystal structure of uncharacterized conserved protein from methanocaldococcus jannaschii · an experimental structure of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q59055
- Elsewhere: UniProt Q59055 · AlphaFold DB Q59055
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