Research workbench
AlphaFold monomer V2.0 prediction for PYRIDOXINE/PYRIDOXAL/PYRIDOXAMINE kinase (P40191)
Analyse AlphaFold monomer V2.0 prediction for PYRIDOXINE/PYRIDOXAL/PYRIDOXAMINE kinase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P40191
- Type
- protein
- Length
- 283 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB3Ab416696389A921046DDA22F83Be8e512fde4d
- Molecule
- PYRIDOXINE/PYRIDOXAL/PYRIDOXAMINE kinase
- UniProt
- P40191
- Pockets
- 1 · best druggability 0.79
Structure
1 distinct chain · 38% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | PYRIDOXINE/PYRIDOXAL/PYRIDOXAMINE kinase | protein | 283 | 38% helix, 20% strand | P40191 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 717 | 0.79 | 0.83 | 63 | empty |
Compared structures
- 2DDO · Crystal structure of pyridoxal kinase from the escherichia COLI pdxk gene at 2.6 a… · an experimental structure of the same protein · chain A against A, TM-score 0.92
- 2DDO · Crystal Structure of Pyridoxal Kinase from the Escherichia coli pdxK gene at 2.6 A… · an experimental structure of the same protein · chain A against A, TM-score 0.92
- 2DDM · Crystal Structure of Pyridoxal Kinase from the Escherichia coli PdxK gene at 2.1 A… · an experimental structure of the same protein · chain A against A, TM-score 0.92
- 2DDM · Crystal structure of pyridoxal kinase from the escherichia COLI pdxk gene at 2.1 a… · an experimental structure of the same protein · chain A against A, TM-score 0.92
- 2DDW · Crystal Structure of Pyridoxal Kinase from the Escherichia coli PdxK gene complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.91
- 2DDW · Crystal structure of pyridoxal kinase from the escherichia COLI pdxk gene complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.91
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P40191
- Elsewhere: UniProt P40191 · AlphaFold DB P40191
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