Research workbench
AlphaFold monomer V2.0 prediction for pyridoxal-dependent decarboxylase domain-containing protein 1 (Q99K01)
Analyse AlphaFold monomer V2.0 prediction for pyridoxal-dependent decarboxylase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q99K01
- Type
- protein
- Length
- 787 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd4e637F33801C93D747D9f6a36b53Bee704968e6
- Molecule
- Pyridoxal-dependent decarboxylase domain-containing protein 1
- UniProt
- Q99K01
- Pockets
- 9 · best druggability 0.57
Structure
1 distinct chain · 45% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pyridoxal-dependent decarboxylase domain-containing protein 1 | protein | 787 | 45% helix, 11% strand | Q99K01 |
Pockets
9 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 256 | 0.57 | 0.78 | 33 | empty |
| 2 | 132 | 0.50 | 0.79 | 25 | empty |
| 3 | 88 | 0.48 | 0.82 | 18 | empty |
| 4 | 132 | 0.45 | 0.77 | 26 | empty |
| 5 | 113 | 0.39 | 0.75 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q99K01
- Elsewhere: UniProt Q99K01 · AlphaFold DB Q99K01
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