Research workbench
AlphaFold monomer V2.0 prediction for pyridoxal-dependent decarboxylase domain-containing protein 1 (A7MBC2)
Analyse AlphaFold monomer V2.0 prediction for pyridoxal-dependent decarboxylase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A7MBC2
- Type
- protein
- Length
- 787 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x54845eE8b01D7512f3AfFaC0fa1a19a5Bcac5CB8
- Molecule
- Pyridoxal-dependent decarboxylase domain-containing protein 1
- UniProt
- A7MBC2
- Pockets
- 8 · best druggability 0.60
Structure
1 distinct chain · 46% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pyridoxal-dependent decarboxylase domain-containing protein 1 | protein | 787 | 46% helix, 11% strand | A7MBC2 |
Pockets
8 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 368 | 0.60 | 0.77 | 39 | empty |
| 2 | 152 | 0.48 | 0.77 | 25 | empty |
| 3 | 240 | 0.48 | 0.74 | 32 | empty |
| 4 | 119 | 0.47 | 0.79 | 25 | empty |
| 5 | 69 | 0.42 | 0.81 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A7MBC2
- Elsewhere: UniProt A7MBC2 · AlphaFold DB A7MBC2
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