Research workbench
AlphaFold monomer V2.0 prediction for transcription factor PDR1 (P12383)
Analyse AlphaFold monomer V2.0 prediction for transcription factor PDR1 (P12383) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P12383
- Type
- protein
- Length
- 1,068 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7FDF8b382C6a36A8772D1A265E8e480c7DF0A9C1
- Molecule
- Transcription factor PDR1
- UniProt
- P12383
- Pockets
- 10 · best druggability 0.87
Structure
1 distinct chain · 52% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcription factor PDR1 | protein | 1068 | 52% helix, 1% strand | P12383 |
Pockets
10 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1153 | 0.87 | 0.88 | 97 | empty |
| 2 | 653 | 0.80 | 0.85 | 64 | empty |
| 3 | 620 | 0.78 | 0.84 | 58 | empty |
| 4 | 374 | 0.64 | 0.79 | 31 | empty |
| 5 | 66 | 0.54 | 0.87 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P12383
- Elsewhere: UniProt P12383 · AlphaFold DB P12383
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