Research workbench
AlphaFold monomer V2.0 prediction for PDZ and lim domain protein 3 (O70209)
Analyse AlphaFold monomer V2.0 prediction for PDZ and lim domain protein 3 (O70209) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O70209
- Type
- protein
- Length
- 316 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xD83981a883D2d1ed3d8b29434a5fa2bAa14a52D7
- Molecule
- PDZ and lim domain protein 3
- UniProt
- O70209
- Pockets
- 1 · best druggability 0.28
Structure
1 distinct chain · 20% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | PDZ and lim domain protein 3 | protein | 316 | 20% helix, 16% strand | O70209 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 65 | 0.28 | 0.74 | 14 | empty |
Compared structures
- 1X64 · Solution structure of the LIM domain of alpha-actinin-2 associated LIM protein · an experimental structure of the same protein · chain A against A, TM-score 0.20
- 1X64 · Solution structure of the lim domain of alpha-actinin-2 associated lim protein · an experimental structure of the same protein · chain A against A, TM-score 0.20
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O70209
- Elsewhere: UniProt O70209 · AlphaFold DB O70209
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