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AlphaFold monomer V2.0 prediction for SERINE/THREONINE-protein kinase PDK1 (J9VH94)
Analyse AlphaFold monomer V2.0 prediction for SERINE/THREONINE-protein kinase PDK1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- J9VH94
- Type
- protein
- Length
- 1,230 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x78Cc7f9BF18AF8279e492D45EE7Fe9d7cC6f6D07
- Molecule
- SERINE/THREONINE-protein kinase PDK1
- UniProt
- J9VH94
- Pockets
- 6 · best druggability 0.76
Structure
1 distinct chain · 13% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | SERINE/THREONINE-protein kinase PDK1 | protein | 1230 | 13% helix, 8% strand | J9VH94 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 897 | 0.76 | 0.80 | 66 | empty |
| 2 | 244 | 0.50 | 0.75 | 32 | empty |
| 3 | 188 | 0.47 | 0.75 | 22 | empty |
| 4 | 157 | 0.43 | 0.75 | 33 | empty |
| 5 | 121 | 0.40 | 0.75 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt J9VH94
- Elsewhere: UniProt J9VH94 · AlphaFold DB J9VH94
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