Research workbench
AlphaFold monomer V2.0 prediction for pyruvate decarboxylase 1 (P28516)
Analyse AlphaFold monomer V2.0 prediction for pyruvate decarboxylase 1 (P28516) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P28516
- Type
- protein
- Length
- 610 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6DAA77C4263E74E745cA9c4D8E291e57e8991Cf5
- Molecule
- Pyruvate decarboxylase 1
- UniProt
- P28516
- Pockets
- 4 · best druggability 0.68
Structure
1 distinct chain · 37% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pyruvate decarboxylase 1 | protein | 610 | 37% helix, 16% strand | P28516 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 64 | 0.68 | 0.95 | 23 | empty |
| 2 | 353 | 0.63 | 0.79 | 40 | empty |
| 3 | 452 | 0.62 | 0.76 | 49 | empty |
| 4 | 51 | 0.27 | 0.74 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P28516
- Elsewhere: UniProt P28516 · AlphaFold DB P28516
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