Research workbench
AlphaFold monomer V2.0 prediction for sister chromatid cohesion protein PDS5 homolog B-a (Q498H0)
Analyse AlphaFold monomer V2.0 prediction for sister chromatid cohesion protein PDS5… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q498H0
- Type
- protein
- Length
- 1,448 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1ED4a68B4011314730adE976b56Ad4cA21b54dcD
- Molecule
- Sister chromatid cohesion protein PDS5 homolog B-a
- UniProt
- Q498H0
- Pockets
- 12 · best druggability 0.75
Structure
1 distinct chain · 56% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sister chromatid cohesion protein PDS5 homolog B-a | protein | 1448 | 56% helix, 0% strand | Q498H0 |
Pockets
12 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 340 | 0.75 | 0.86 | 43 | empty |
| 2 | 170 | 0.62 | 0.84 | 23 | empty |
| 3 | 210 | 0.54 | 0.78 | 21 | empty |
| 4 | 195 | 0.53 | 0.78 | 32 | empty |
| 5 | 74 | 0.49 | 0.84 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q498H0
- Elsewhere: UniProt Q498H0 · AlphaFold DB Q498H0
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