Research workbench
AlphaFold monomer V2.0 prediction for pericentriolar material 1 protein (Q8AV28)
Analyse AlphaFold monomer V2.0 prediction for pericentriolar material 1 protein (Q8AV28) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8AV28
- Type
- protein
- Length
- 1,904 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5f16694a000281156834B5aF7C1a168819505c33
- Molecule
- Pericentriolar material 1 protein
- UniProt
- Q8AV28
- Pockets
- 3 · best druggability 0.55
Structure
1 distinct chain · 32% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pericentriolar material 1 protein | protein | 1904 | 32% helix, 0% strand | Q8AV28 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 294 | 0.55 | 0.76 | 32 | empty |
| 2 | 63 | 0.45 | 0.82 | 15 | empty |
| 3 | 74 | 0.33 | 0.75 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8AV28
- Elsewhere: UniProt Q8AV28 · AlphaFold DB Q8AV28
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