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AlphaFold monomer V2.0 prediction for phosphoenolpyruvate carboxykinase (ATP), glycosomal (P51058)

Analyse AlphaFold monomer V2.0 prediction for phosphoenolpyruvate carboxykinase (ATP)… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P51058
Type: protein
Length: 472 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x9F605311B7e26e76340423EfAfbE5e2EFc7A0b7C
Molecule: Phosphoenolpyruvate carboxykinase (ATP), glycosomal
UniProt: P51058
Pockets: 5 · best druggability 0.67

Structure

1 distinct chain · 26% helix, 27% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Phosphoenolpyruvate carboxykinase (ATP), glycosomal	protein	472	26% helix, 27% strand	P51058

Pockets

5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	347	0.67	0.81	45	empty
2	143	0.48	0.78	31	empty
3	129	0.47	0.78	28	empty
4	123	0.40	0.75	22	empty
5	57	0.29	0.75	13	empty

Compared structures

1II2 · Crystal structure of phosphoenolpyruvate carboxykinase (pepck) from trypanosoma cruzi · an experimental structure of the same protein · chain A against A, TM-score 0.99
1II2 · Crystal Structure of Phosphoenolpyruvate Carboxykinase (PEPCK) from Trypanosoma cruzi · an experimental structure of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P51058
Elsewhere: UniProt P51058 · AlphaFold DB P51058

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