Research workbench
AlphaFold monomer V2.0 prediction for phosphoenolpyruvate carboxykinase (ATP) (Q500D1)
Analyse AlphaFold monomer V2.0 prediction for phosphoenolpyruvate carboxykinase (ATP)… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q500D1
- Type
- protein
- Length
- 514 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd91633319BDB0a92cbC4f08DeA734Bf74C030064
- Molecule
- Phosphoenolpyruvate carboxykinase (ATP)
- UniProt
- Q500D1
- Pockets
- 4 · best druggability 0.75
Structure
1 distinct chain · 29% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphoenolpyruvate carboxykinase (ATP) | protein | 514 | 29% helix, 26% strand | Q500D1 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 516 | 0.75 | 0.83 | 62 | empty |
| 2 | 103 | 0.41 | 0.76 | 18 | empty |
| 3 | 107 | 0.36 | 0.74 | 21 | empty |
| 4 | 75 | 0.32 | 0.74 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q500D1
- Elsewhere: UniProt Q500D1 · AlphaFold DB Q500D1
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