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AlphaFold monomer V2.0 prediction for protocadherin-7 (O60245)

Analyse AlphaFold monomer V2.0 prediction for protocadherin-7 (O60245) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: O60245
Type: protein
Length: 1,069 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xA9E784B624D9b03071F1a8dB9b84234705aa612e
Molecule: Protocadherin-7
UniProt: O60245
Pockets: 3 · best druggability 0.35

Structure

1 distinct chain · 7% helix, 32% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protocadherin-7	protein	1069	7% helix, 32% strand	O60245

Pockets

3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	114	0.35	0.73	20	empty
2	57	0.31	0.76	11	empty
3	58	0.31	0.75	10	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

2YST · Solution structure of the third cadherin domain from human protocadherin 7 · an experimental structure of the same protein · chain A against A, TM-score 0.10
2YST · Solution structure of the third cadherin domain from human protocadherin 7 · an experimental structure of the same protein · chain A against A, TM-score 0.10

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O60245
Elsewhere: UniProt O60245 · AlphaFold DB O60245

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