Research workbench
AlphaFold monomer V2.0 prediction for protocadherin beta-13 (Q9Y5F0)
Analyse AlphaFold monomer V2.0 prediction for protocadherin beta-13 (Q9Y5F0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9Y5F0
- Type
- protein
- Length
- 798 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x866b846BF04951b9214b46ED5E3FC54E8e4ab00f
- Molecule
- Protocadherin beta-13
- UniProt
- Q9Y5F0
- Pockets
- 2 · best druggability 0.35
Structure
1 distinct chain · 8% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protocadherin beta-13 | protein | 798 | 8% helix, 37% strand | Q9Y5F0 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 77 | 0.35 | 0.76 | 16 | empty |
| 2 | 58 | 0.31 | 0.76 | 11 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y5F0
- Elsewhere: UniProt Q9Y5F0 · AlphaFold DB Q9Y5F0
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