Research workbench
AlphaFold monomer V2.0 prediction for protocadherin beta-1 (Q9Y5F3)
Analyse AlphaFold monomer V2.0 prediction for protocadherin beta-1 (Q9Y5F3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9Y5F3
- Type
- protein
- Length
- 818 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC8051e607417A2890274BC226Eb475379945EA5C
- Molecule
- Protocadherin beta-1
- UniProt
- Q9Y5F3
- Pockets
- 1 · best druggability 0.34
Structure
1 distinct chain · 8% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protocadherin beta-1 | protein | 818 | 8% helix, 35% strand | Q9Y5F3 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 81 | 0.34 | 0.75 | 14 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y5F3
- Elsewhere: UniProt Q9Y5F3 · AlphaFold DB Q9Y5F3
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