Research workbench
AlphaFold monomer V2.0 prediction for protocadherin-12 (Q9NPG4)
Analyse AlphaFold monomer V2.0 prediction for protocadherin-12 (Q9NPG4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9NPG4
- Type
- protein
- Length
- 1,184 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7FC89EC214E88EEb38fAa127e1E19d1b331AC902
- Molecule
- Protocadherin-12
- UniProt
- Q9NPG4
- Pockets
- 2 · best druggability 0.69
Structure
1 distinct chain · 13% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protocadherin-12 | protein | 1184 | 13% helix, 25% strand | Q9NPG4 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 750 | 0.69 | 0.76 | 47 | empty |
| 2 | 56 | 0.26 | 0.73 | 14 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9NPG4
- Elsewhere: UniProt Q9NPG4 · AlphaFold DB Q9NPG4
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