Research workbench
AlphaFold monomer V2.0 prediction for penicillin-binding protein 1B (P57296)
Analyse AlphaFold monomer V2.0 prediction for penicillin-binding protein 1B (P57296) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P57296
- Type
- protein
- Length
- 760 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x01001dc0c2B5C887e3EcBADC77D1357Fe8e7de78
- Molecule
- Penicillin-binding protein 1B
- UniProt
- P57296
- Pockets
- 12 · best druggability 0.76
Structure
1 distinct chain · 41% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Penicillin-binding protein 1B | protein | 760 | 41% helix, 19% strand | P57296 |
Pockets
12 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 645 | 0.76 | 0.82 | 59 | empty |
| 2 | 50 | 0.69 | 0.97 | 18 | empty |
| 3 | 458 | 0.59 | 0.75 | 47 | empty |
| 4 | 197 | 0.50 | 0.76 | 36 | empty |
| 5 | 197 | 0.48 | 0.75 | 34 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P57296
- Elsewhere: UniProt P57296 · AlphaFold DB P57296
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.