Research workbench
AlphaFold monomer V2.0 prediction for PAX3- and PAX7-binding protein 1 (Q9Y5B6)
Analyse AlphaFold monomer V2.0 prediction for PAX3- and PAX7-binding protein 1 (Q9Y5B6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9Y5B6
- Type
- protein
- Length
- 917 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9188600a0FCa2914254C94299b1bd9721Bc4D500
- Molecule
- PAX3- and PAX7-binding protein 1
- UniProt
- Q9Y5B6
- Pockets
- 7 · best druggability 0.77
Structure
1 distinct chain · 50% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | PAX3- and PAX7-binding protein 1 | protein | 917 | 50% helix, 0% strand | Q9Y5B6 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 225 | 0.77 | 0.91 | 35 | empty |
| 2 | 137 | 0.59 | 0.84 | 21 | empty |
| 3 | 173 | 0.44 | 0.74 | 19 | empty |
| 4 | 59 | 0.32 | 0.77 | 17 | empty |
| 5 | 56 | 0.30 | 0.76 | 14 | empty |
Compared structures
- 8RO2 · Integrative Structure of the human intron lariat Spliceosome (ILS'') · an experimental structure of the same protein · chain A against PX, TM-score 0.25
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y5B6
- Elsewhere: UniProt Q9Y5B6 · AlphaFold DB Q9Y5B6
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.