Research workbench
AlphaFold monomer V2.0 prediction for putrescine aminotransferase (Q8Z3L9)
Analyse AlphaFold monomer V2.0 prediction for putrescine aminotransferase (Q8Z3L9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8Z3L9
- Type
- protein
- Length
- 459 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2a4F51CacdE69AF149E8aF7a5Afb18a1E9398A69
- Molecule
- Putrescine aminotransferase
- UniProt
- Q8Z3L9
- Pockets
- 5 · best druggability 0.64
Structure
1 distinct chain · 48% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putrescine aminotransferase | protein | 459 | 48% helix, 16% strand | Q8Z3L9 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 340 | 0.64 | 0.79 | 44 | empty |
| 2 | 287 | 0.56 | 0.76 | 24 | empty |
| 3 | 75 | 0.50 | 0.84 | 12 | empty |
| 4 | 154 | 0.45 | 0.76 | 27 | empty |
| 5 | 57 | 0.28 | 0.74 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8Z3L9
- Elsewhere: UniProt Q8Z3L9 · AlphaFold DB Q8Z3L9
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