Research workbench
AlphaFold monomer V2.0 prediction for DNA topoisomerase 4 subunit B (Q2FYS5)
Analyse AlphaFold monomer V2.0 prediction for DNA topoisomerase 4 subunit B (Q2FYS5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q2FYS5
- Type
- protein
- Length
- 663 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd8D116132E2695FBadcaD540BCAfA7138E178701
- Molecule
- DNA topoisomerase 4 subunit B
- UniProt
- Q2FYS5
- Pockets
- 9 · best druggability 0.84
Structure
1 distinct chain · 39% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA topoisomerase 4 subunit B | protein | 663 | 39% helix, 20% strand | Q2FYS5 |
Pockets
9 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 932 | 0.84 | 0.86 | 101 | empty |
| 2 | 305 | 0.72 | 0.85 | 34 | empty |
| 3 | 204 | 0.61 | 0.82 | 24 | empty |
| 4 | 133 | 0.56 | 0.82 | 25 | empty |
| 5 | 64 | 0.44 | 0.82 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2FYS5
- Elsewhere: UniProt Q2FYS5 · AlphaFold DB Q2FYS5
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