Research workbench
AlphaFold monomer V2.0 prediction for pap fimbrial minor pilin protein (P07111)
Analyse AlphaFold monomer V2.0 prediction for pap fimbrial minor pilin protein (P07111) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P07111
- Type
- protein
- Length
- 195 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x46EfCa788d03A3e879DAcDb96552AB8Bbc7e20b3
- Molecule
- Pap fimbrial minor pilin protein
- UniProt
- P07111
- Pockets
- 2 · best druggability 0.36
Structure
1 distinct chain · 7% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pap fimbrial minor pilin protein | protein | 195 | 7% helix, 28% strand | P07111 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 54 | 0.36 | 0.79 | 17 | empty |
| 2 | 52 | 0.34 | 0.78 | 20 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 2J2Z · X-Ray Structure of the Chaperone PapD in complex with the Pilus terminator subunit PapH… · an experimental structure of the same protein · chain A against B, TM-score 0.74
- 2J2Z · X-ray structure of the chaperone papd in complex with the pilus terminator subunit paph… · an experimental structure of the same protein · chain A against B, TM-score 0.74
- 2XG4 · E. COLI P pilus chaperone-subunit complex papd-paph bound to pilus biogenesis inhibitor… · an experimental structure of the same protein · chain A against B, TM-score 0.74
- 2XG4 · E. coli P pilus chaperone-subunit complex PapD-PapH bound to pilus biogenesis inhibitor… · an experimental structure of the same protein · chain A against B, TM-score 0.74
- 2XG5 · E. coli P pilus chaperone-subunit complex PapD-PapH bound to pilus biogenesis inhibitor… · an experimental structure of the same protein · chain A against B, TM-score 0.73
- 2XG5 · E. COLI P pilus chaperone-subunit complex papd-paph bound to pilus biogenesis inhibitor… · an experimental structure of the same protein · chain A against B, TM-score 0.73
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P07111
- Elsewhere: UniProt P07111 · AlphaFold DB P07111
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